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Phylogen

Phylogen implements some straight-forward birth-death models for simulating phylogenies. It is intended to be fast and flexible and can simulate very large trees (depending on memory and speed of computer). It will then optionally reconstruct trees only containing extant lineages … Continue reading

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Rating: 4.4. From 8 votes.
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Posted in Evolution and Population Genetics | Leave a comment

Genie

A program for the inference of demographic history from molecular phylogenies. It is primarily designed for the analysis of phylogenies reconstructed from highly variable viral gene sequences, but can be applied to other types of sequence data that contains a … Continue reading

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Rating: 3.3. From 3 votes.
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Posted in Evolution and Population Genetics | Leave a comment

Ecolab

Ecolab is both the name of a software package and a research project that is looking at the dynamics of evolution. Find Ecolab at: http://ecolab.sourceforge.net/

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Rating: 3.2. From 6 votes.
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Posted in Evolution and Population Genetics | Leave a comment