OpenScience / Software / Life Sciences



BioMail

new references from Medline to your e-mail account Find BioMail at: http://biomail.sourceforge.net/biomail/

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Posted in Medical Sciences | Leave a comment

BioJava

Java tools for processing biological data Find BioJava at: http://www.biojava.org/

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Posted in Life Sciences | Leave a comment

Ecolab

Ecolab is both the name of a software package and a research project that is looking at the dynamics of evolution. Find Ecolab at: http://ecolab.sourceforge.net/

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Posted in Evolution and Population Genetics | Leave a comment

Spatial Modeling Environment

The Spatial Modeling Environment (SME) is an integrated environment for high performance spatial modeling which transparently links icon-based modeling tools with advanced computing resources to support dynamic spatial modeling of complex systems Find Spatial Modeling Environment at: http://sourceforge.net/projects/smodenv/

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Posted in Theoretical | Leave a comment

E-CELL

E-CELL Simulation Environment (E-CELL SE) is a software package for cellular and biochemical modeling and simulation. Find E-CELL at: http://www.bioinformatics.org/e-cell/

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Posted in Bioinformatics | Leave a comment

DEODAS

DEgenerate Oligonucleotide Design & Analysis System (DEODAS), for designing and electronically analyzing consensus-degenerate oligonucleotides Find DEODAS at: http://deodas.sourceforge.net/

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Posted in Bioinformatics | Leave a comment

Genpak

GP and Arka are lightweight programs for manipulation of DNA / RNA / protein sequences. Find Genpak at: http://www.bioinformatics.org/genpak/

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Posted in Bioinformatics | Leave a comment

Mavric

Mavric is a python module for the manipulation and visualization of phylogenetic trees. Find Mavric at: http://www.bioinformatics.org/mavric/

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Posted in Bioinformatics | Leave a comment

Bioperl

The Bioperl Project is an international association of developers of open source Perl tools for bioinformatics, genomics and life science research. Find Bioperl at: http://bio.perl.org/

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Posted in Bioinformatics, Life Sciences | Leave a comment

PhysioNet

Research Resource for Complex Physiologic Signals Find PhysioNet at: http://www.physionet.org/

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Posted in Physiology | Leave a comment