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OpenScience / Software / Chemistry / Molecule Viewers and Editors
Garlic
Garlic is a free molecular visualization program written for unix and unix clones. Find Garlic at: http://www.zucic.org/garlic/
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xyz2rgb
xyz2rgb makes pretty pictures and movies of molecules. It expects input in the form of an XYZ file, one of the file formats frequently used by computational chemists. As output, it produces one or more line-interlaced RGB files. Find xyz2rgb … Continue reading
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VASP Data Viewer
A free, open source 3D viewer for molecular charge distributions. Find VASP Data Viewer at: http://vaspview.sourceforge.net/
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Chemsuite Project
Chemsuite is a set of programs intended to provide to chemists an alternative to commercial chemistry office suites. Find Chemsuite Project at: http://chemsuite.seul.org/
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BallRoom
a tool to draw large ensembles of atoms Find BallRoom at: http://www.fisica.uniud.it/~ercolessi/ballroom.html
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Ghemical
Ghemical is a computational chemistry software package released under the GNU GPL. Ghemical can do all-atoms molecular mechanics (there is an experimental Tripos 5.2-like force field for organic molecules), and reduced protein models. Find Ghemical at: http://www.bioinformatics.org/ghemical/ghemical/index.html
OpenChem
A python-based program for investigating nanotechnology, molecular structures, machines, and phenomena Find OpenChem at: http://www.openchem.org/
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JChemPaint
A Java program for drawing of 2D chemical structures Find JChemPaint at: http://jchempaint.sourceforge.net
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Jmol
Jmol is a free, open source molecule viewer for students, educators, and researchers in chemistry and biochemistry. It is cross-platform, running on Windows, Mac OS X, and Linux/Unix systems. It includes a web browser applet that can be integrated into … Continue reading
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