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OpenScience / Software / Life Sciences
CellMissy: Cell Migration Invasion Storage System
CellMissy is a cross-platform data management system for cell migration/invasion data that simplifies and fully automates data management, storage and analysis, from experimental set-up to data visualization and exploration. CellMissy is a client-server application with a graphical user interface on … Continue reading
Posted in Bioinformatics
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Pathomx
Pathomx is a workflow-based tool for the analysis and visualisation of experimental data. Initially created as a tool for metabolomic data analysis is has been extended and can now be used for any scientific and non-scientific data analysis. The software … Continue reading
Posted in Bioinformatics
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Unipro UGENE
A free open-source cross-platform bioinformatics tool. It integrates dozens of well-known biological tools and algorithms, providing both graphical user and command line interfaces. Using UGENE Workflow Designer, one can arrange the required tools and algorithms into a workflow schema. Find … Continue reading
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SPINA: Structure parameter inference approach
SPINA (structure parameter inference approach) is a method that allows for calculating constant structure parameters of endocrine feedback control systems in vivo from hormone levels obtained from serum or plasma. A first successful implementation applies to evaluation of thyroid function. … Continue reading
Posted in Medical Sciences
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GENtle2
An updated, open source (MPL 2.0), web-based version of GENtle. Find GENtle2 at: http://gentledna.org
Posted in Bioinformatics
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Bio-Linux 7 – NEBC
Bio-Linux 7 is a fully featured, powerful, configurable and easy to maintain bioinformatics workstation. Bio-Linux provides more than 500 bioinformatics programs … Find Bio-Linux 7 – NEBC at: http://nebc.nerc.ac.uk/tools/bio-linux/bio-linux-7-info
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SimThyr, a numerical simulator of thyrotropic feedback control for education and research
SimThyr is a simulation program for the pituitary thyroid feedback control that is based on a parametrically isomorphic model of the overall system. Applications of this program cover research, including development of hypotheses, and education of students in biology and … Continue reading
Posted in Medical Sciences, Physiology
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BioBike
A platform for knowledge-based computational biology. Written in Lisp, downloadable or accessible through our web servers. Find BioBike at: http://biolisp.org
Posted in Bioinformatics
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Sysmo db
SysMO-DB is a web-based platform for finding, sharing and exchanging Data, Models and Processes in Systems Biology. It was designed to support the SysMO Consortium (Systems Biology for Micro-Organisms), but the principles and methods employed are equally applicable to other … Continue reading
Posted in Life Sciences
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Biocatalogue
The BioCatalogue is a registry of biological Web Services. The BioCatalogue website is freely accessible to the world as it is searchable and indexable to search engines. It provides an open platform for biological Web Services registration, annotation and monitoring. … Continue reading
Posted in Bioinformatics
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