OpenScience / Software



MayaChemTools

Posted on April 21, 2005 by Dan Gezelter

MayaChemTools provides a variety of scripts – some straightforward and others a bit more involved – to work with SD files, CSV/TSV text files, and databases: splitting, joining, merging, and sorting SD and text files; merging text files into SD … Continue reading →

Share
Posted in Chemical Information | Leave a comment

clados Project

Posted on April 18, 2005 by Dan Gezelter

The Clados Project maintains an open source java library capable of implementing geometric algebras (Clifford Algebras) in computer applications designed to simulate physical events and environments. Find clados Project at: http://clados.sourceforge.net/

Share
Posted in Mathematics | Leave a comment

Calculix

Posted on April 14, 2005 by Dan Gezelter

Finite element package which accepts Abaqus INP files. Includes pre- and post-processor Find Calculix at: http://www.calculix.de

Share
Posted in Engineering | Leave a comment

Fluid Dynamics

Posted on April 10, 2005 by Dan Gezelter

The OpenFOAM (Field Operation and Manipulation) software package can simulate anything from complex fluid flows involving chemical reactions, turbulence and heat transfer, to solid dynamics, electromagnetics and the pricing of financial options. Find Fluid Dynamics at: http://www.opencfd.co.uk/openfoam/

Share
Posted in Engineering | Leave a comment

Genomorama

Posted on March 14, 2005 by Dan Gezelter

Genomorama is a software program for interactively displaying multiple genomes. It provides a powerful yet easy to use interface that leverages the visualization power of modern computers (via OpenGL) and the substantial bioinformatic infrastructure provided by the NCBI (via the … Continue reading →

Share
Posted in Bioinformatics | Leave a comment

OpenFOAM and QtiPlot

Posted on March 8, 2005 by Dan Gezelter

OpenFOAM looks like a neat project in the Fluid Dynamics section. We also just found out about a new Qt interface for gnuplot that goes by the name QtiPlot. Anything that makes gnuplot friendlier is a good thing (in our … Continue reading →

Share
Posted in Software | 1 Comment

OpenFOAM

Posted on March 8, 2005 by Dan Gezelter

The OpenFOAM (Field Operation and Manipulation) software package can simulate anything from complex fluid flows involving chemical reactions, turbulence and heat transfer, to solid dynamics, electromagnetics and the pricing of financial options. Find OpenFOAM at: http://www.openfoam.org

Share
Posted in Fluid Dynamics | Leave a comment

QtiPlot

Posted on March 6, 2005 by Dan Gezelter

From the website:"As a scientist I often need to use data analysis and plotting software. One of the best scientific software I’ve ever seen is Gnuplot. It has the advantage of being free, but every one who has ever used … Continue reading →

Share
Posted in Visualization | Leave a comment

Archaeology! Parallel Computing! Molecular Dynamics!

Posted on March 3, 2005 by Dan Gezelter

A bunch of new links today. In the Anthropology and Archaeology section, we’ve got two brand-new links. One is for a site specializing in Open Source in Archaeology, the other is for Walldrawer, a tool for producing scaled, rectified drawings … Continue reading →

Share
Posted in Software | Leave a comment

Internet and Open Source in Archaeology

Posted on February 28, 2005 by Dan Gezelter

The goal of this site is to promote the use of open source software and open stardards in archaeological computing. Find Internet and Open Source in Archaeology at: http://www.iosa.it

Share
Posted in Anthropology and Archaeology | Leave a comment